Performance (CPU & memory usage)
The CPU time & memory usage for running cobind.py stat between two bed file with different number of intervals.
CPU model: Intel(R) Xeon(R) Gold 6248 CPU @ 2.50GHz
# of intervals in A |
# of intervals in B |
Real time (seconds) |
Max memory (GB) |
|---|---|---|---|
100,000 |
100,000 |
7.040 |
0.822 |
200,000 |
200,000 |
9.384 |
0.938 |
300,000 |
300,000 |
11.798 |
0.957 |
400,000 |
400,000 |
14.307 |
1.002 |
500,000 |
500,000 |
16.563 |
1.049 |
600,000 |
600,000 |
18.893 |
1.057 |
700,000 |
700,000 |
21.599 |
1.097 |
800,000 |
800,000 |
23.874 |
1.146 |
900,000 |
900,000 |
27.262 |
1.166 |
1,000,000 |
1,000,000 |
29.472 |
1.220 |